MASAMUNE-II User manual
User manual(日本語)
CCMS
User manual(日本語)
CCMS
Index
Contents:
1. How to Login
1.1. Node name of the supercomputing system in CCMS
1.2. Register SSH Public Key
1.3. How to login servers
1.4. How to use SSH relay server
1.5. (Reference)How to login with Tera Term(Windows)
2. Configuration of storage
3. Job submit/management commands
3.1. Job submit command(qsub command)
3.2. Format of an execution script
3.3. Interactive mode
3.4. Submitting jobs to Shared-Queue
3.5. Job management command
3.6. Display information about used and remained time of job execution
3.7. How to execute a MPI job
3.8. List of queues
4. Compilers and Libraries
4.1. Intel Compiler
4.2. NVIDIA HPC Compiler
4.3. CUDA toolkit
4.4. Usage of Library
5. Usage of applications
5.1. Applications
5.2. Gaussian
5.3. GaussView 6
5.4. AVS/Express Developer
5.5. Materials Studio
5.6. CRYSTAL17
5.7. VASP 5
5.8. VASP 6
5.9. WIEN2k
5.10. ADF
5.11. ADF GUI
5.12. SIESTA
5.13. ABINIT
5.14. CPMD
5.15. QUANTUM ESPRESSO
5.16. LAMMPS
5.17. XCrySDen
5.18. Keras
5.19. TensorFlow
5.20. PyTorch
5.21. Japanese-compatible TeX
6. Usage of Python
6.1. About using Python
6.2. Install pyenv
6.3. Backing up the pyenv environment from the previous system
6.4. Setting environment variables
6.5. Operational check
6.6. Basic usage
6.7. Execution method
7. CCMS JupyterLab
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Job submit command(qsub command)
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Job submit/management commands
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Job submit/management commands
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Contents:
3.1. Job submit command(qsub command)
3.1.1. Usage
3.1.2. List of options
3.1.3. Example
3.2. Format of an execution script
3.2.1. Execute a non MPI program
3.2.2. Execute a MPI program
3.2.3. Execute a GPU program
3.3. Interactive mode
3.3.1. Usage
3.3.2. Example
3.4. Submitting jobs to Shared-Queue
3.4.1. Usage
3.4.2. Example
3.5. Job management command
3.5.1. Display your own job information
3.5.2. Display job information
3.5.3. Display queue status
3.5.4. Display server status
3.5.5. Cancel the job before the job finished
3.6. Display information about used and remained time of job execution
3.6.1. Overview
3.6.2. Node time consumption
3.6.3. Consumed time confirmation command
3.6.4. Information
3.6.5. Example
3.7. How to execute a MPI job
3.7.1. Description
3.7.2. Usage(IntelMPI)
3.7.3. Example
3.7.4. Usage(OpenMPI)
3.7.5. Example
3.8. List of queues
3.8.1. HPE Cray XD220v
3.8.2. HPE Scale-up Server 3200
3.8.3. HPE Cray XD670
3.8.4. Front end node
3.8.5. Usage of Application Queue
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Configuration of storage
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