MASAMUNE-II User manual
User manual(日本語)
CCMS
User manual(日本語)
CCMS

Index

Contents:

  • 1. How to Login
    • 1.1. Node name of the supercomputing system in CCMS
    • 1.2. Register SSH Public Key
    • 1.3. How to login servers
    • 1.4. How to use SSH relay server
    • 1.5. (Reference)How to login with Tera Term(Windows)
  • 2. Configuration of storage
  • 3. Job submit/management commands
    • 3.1. Job submit command(qsub command)
    • 3.2. Format of an execution script
    • 3.3. Interactive mode
    • 3.4. Submitting jobs to Shared-Queue
    • 3.5. Job management command
    • 3.6. Display information about used and remained time of job execution
    • 3.7. How to execute a MPI job
    • 3.8. List of queues
  • 4. Compilers and Libraries
    • 4.1. Intel Compiler
    • 4.2. NVIDIA HPC Compiler
    • 4.3. CUDA toolkit
    • 4.4. Usage of Library
  • 5. Usage of applications
    • 5.1. Applications
    • 5.2. Gaussian
    • 5.3. GaussView 6
    • 5.4. AVS/Express Developer
    • 5.5. Materials Studio
    • 5.6. CRYSTAL17
    • 5.7. VASP 5
    • 5.8. VASP 6
    • 5.9. WIEN2k
    • 5.10. ADF
    • 5.11. ADF GUI
    • 5.12. SIESTA
    • 5.13. ABINIT
    • 5.14. CPMD
    • 5.15. QUANTUM ESPRESSO
    • 5.16. LAMMPS
    • 5.17. XCrySDen
    • 5.18. Keras
    • 5.19. TensorFlow
    • 5.20. PyTorch
    • 5.21. Japanese-compatible TeX
  • 6. Usage of Python
    • 6.1. About using Python
    • 6.2. Install pyenv
    • 6.3. Backing up the pyenv environment from the previous system
    • 6.4. Setting environment variables
    • 6.5. Operational check
    • 6.6. Basic usage
    • 6.7. Execution method
  • 7. CCMS JupyterLab

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5.1. Applications

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5. Usage of applications¶

Contents:

  • 5.1. Applications
  • 5.2. Gaussian
  • 5.3. GaussView 6
  • 5.4. AVS/Express Developer
  • 5.5. Materials Studio
    • 5.5.1. SSH port forwarding to the license server and gateway server.
    • 5.5.2. How to set Gateway
    • 5.5.3. How to execute
    • 5.5.4. How to execute CASTEP
    • 5.5.5. How to execute DMol3
    • 5.5.6. How to execute DFTB+
    • 5.5.7. How to execute FlexTS
    • 5.5.8. Confirming Job Status
    • 5.5.9. Canceling Job
  • 5.6. CRYSTAL17
  • 5.7. VASP 5
  • 5.8. VASP 6
  • 5.9. WIEN2k
  • 5.10. ADF
  • 5.11. ADF GUI
  • 5.12. SIESTA
  • 5.13. ABINIT
  • 5.14. CPMD
  • 5.15. QUANTUM ESPRESSO
  • 5.16. LAMMPS
  • 5.17. XCrySDen
  • 5.18. Keras
  • 5.19. TensorFlow
  • 5.20. PyTorch
  • 5.21. Japanese-compatible TeX
  • ← 4.4. Usage of Library
  • 5.1. Applications →
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