CPMD
CPMD is available on the following servers.
important
Please contact us if you would like to use CPMD.
Large-Scale Parallel Computing Server
Available executables
Version | Path |
---|---|
4.1 | /work/app/CPMD/current |
4.3 | /work/app/CPMD/CPMD4.3 |
Create a script file in advance.
#!/bin/sh #PBS -l select=nodes #PBS -q queue #PBS -N jobname DIRNAME=`basename $PBS_O_WORKDIR` WORKDIR=/work/$USER/$PBS_JOBID mkdir -p $WORKDIR cp -raf $PBS_O_WORKDIR $WORKDIR cd $WORKDIR/$DIRNAME aprun [ -n MPI total tasks ][ -N MPI tasks per node ] -j 1 /work/app/CPMD/current/bin/cpmd.x < input file > output file 2> error file cd; if cp -raf $WORKDIR/$DIRNAME $PBS_O_WORKDIR/.. ; then rm -rf $WORKDIR; fi
(Example)
#!/bin/sh #PBS -l select=1 #PBS -q P_016 #PBS -N cpmd DIRNAME=`basename $PBS_O_WORKDIR` WORKDIR=/work/$USER/$PBS_JOBID mkdir -p $WORKDIR cp -raf $PBS_O_WORKDIR $WORKDIR cd $WORKDIR/$DIRNAME aprun -n 36 -N 36 -j 1/work/app/CPMD/current/bin/cpmd.x inp-1 > cpmd.out 2> cpmd.err cd; if cp -raf $WORKDIR/$DIRNAME $PBS_O_WORKDIR/.. ; then rm -rf $WORKDIR; fi
Parallel Computing and Informatics Server
Available executables
Version | Path | Queue |
---|---|---|
4.1 | /usr/local/app/CPMD/current | C_002 C_004 |
4.3 | /usr/local/app/CPMD/CPMD4.3 | C_002 C_004 |
Create a script file in advance.
#!/bin/sh #PBS -l select=nodes #PBS -q queue #PBS -N jobname DIRNAME=`basename $PBS_O_WORKDIR` WORKDIR=/work/$USER/$PBS_JOBID mkdir -p $WORKDIR cp -raf $PBS_O_WORKDIR $WORKDIR cd $WORKDIR/$DIRNAME mpirun [ -np MPI total tasks ][ -ppn MPI tasks per node ] -hostfile $PBS_NODEFILE /usr/local/app/CPMD/current/bin/cpmd.x input file > output file 2> error file cd; if cp -raf $WORKDIR/$DIRNAME $PBS_O_WORKDIR/.. ; then rm -rf $WORKDIR; fi
(Example)
#!/bin/sh #PBS -l select=1 #PBS -q C_002 #PBS -N cpmd DIRNAME=`basename $PBS_O_WORKDIR` WORKDIR=/work/$USER/$PBS_JOBID mkdir -p $WORKDIR cp -raf $PBS_O_WORKDIR $WORKDIR cd $WORKDIR/$DIRNAME mpirun -np 36 -ppn 36 -hostfile $PBS_NODEFILE /usr/local/app/CPMD/current/bin/cpmd.x inp-1 > cpmd.out 2> cpmd.err cd; if cp -raf $WORKDIR/$DIRNAME $PBS_O_WORKDIR/.. ; then rm -rf $WORKDIR; fi
Virtual Server
Available executables
Version | Path |
---|---|
4.1 | /usr/local/app/CPMD/current |
4.3 | /usr/local/app/CPMD/CPMD4.3 |
Execute the commands as follows.
mpirun [ -np MPI total tasks][-ppn MPI tasks per node] -hostfile hostfile /usr/local/app/QuantumESPRESSO/current/bin/pw.x < input file > output file
(Example)
mpirun -np 2 -hostfile hostfile /usr/local/app/QuantumESPRESSO/current/bin/pw.x <cluster4.in > qe.out