#!/bin/sh
#PBS -l select=1
#PBS -q P_016
#PBS -N hello

# move entire directory to /work area, and go to the directory.
DIRNAME=`basename $PBS_O_WORKDIR`
WORKDIR=/work/$USER/$PBS_JOBID
mkdir -p $WORKDIR
cp -raf $PBS_O_WORKDIR $WORKDIR
cd $WORKDIR/$DIRNAME

# Run a program.
# Standard output and error output are redirected to result.out and result.err respectively.
aprun echo "Hello world!" > result.out 2> result.err

# After running a program, move the results back to the original directory.
cd; if cp -raf $WORKDIR/$DIRNAME $PBS_O_WORKDIR/.. ; then rm -rf $WORKDIR; fi